Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinoglycan biosynthesis protein exov | SAMN04488505_103299 | Not Available | Negative | 3686363 - 3687274 | 34702.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_103300 | Not Available | Negative | 3687377 - 3688531 | 44463.4 |
| hypothetical protein | SAMN04488505_103301 | Not Available | Negative | 3688592 - 3689869 | 48086.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_103302 | Not Available | Negative | 3689879 - 3691060 | 44902.3 |
| na+-driven multidrug efflux pump | SAMN04488505_103303 | Not Available | Negative | 3691072 - 3692625 | 57155.4 |
| gdpmannose 4,6-dehydratase | SAMN04488505_103304 | Not Available | Negative | 3692677 - 3693774 | 41527.8 |
| udp-glucose dehydrogenase | SAMN04488505_103305 | Not Available | Negative | 3693859 - 3695202 | 48821.8 |
| gdp-l-fucose synthase | SAMN04488505_103306 | Not Available | Negative | 3695357 - 3696298 | 34901.9 |
| hypothetical protein | SAMN04488505_103307 | Not Available | Positive | 3696334 - 3696450 | 4405.42 |
| mannose-1-phosphate guanylyltransferase | SAMN04488505_103308 | Not Available | Negative | 3696476 - 3697492 | 37004.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
