Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_103289 | Not Available | Negative | 3676169 - 3676918 | 28688.3 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN04488505_103290 | Not Available | Negative | 3677146 - 3678531 | 54656.3 |
| colanic acid biosynthesis glycosyl transferase wcai | SAMN04488505_103291 | Not Available | Negative | 3678552 - 3679817 | 46958.4 |
| putative colanic acid biosynthesis acetyltransferase wcaf | SAMN04488505_103292 | Not Available | Negative | 3679836 - 3680387 | 20253.7 |
| vanz like family protein | SAMN04488505_103293 | Not Available | Negative | 3680389 - 3680832 | 16656.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_103294 | Not Available | Negative | 3680829 - 3681737 | 36018.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_103295 | Not Available | Negative | 3681739 - 3682875 | 43244.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_103296 | Not Available | Negative | 3682892 - 3683968 | 41413.6 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488505_103297 | Not Available | Negative | 3683979 - 3684983 | 38372.0 |
| hypothetical protein | SAMN04488505_103298 | Not Available | Negative | 3684958 - 3686325 | 51117.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
