Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein ypbq, isoprenylcysteine carboxyl methyltransferase (icmt) family | SAMN04488505_103279 | Not Available | Negative | 3667993 - 3668523 | 20282.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_103280 | Not Available | Positive | 3668588 - 3669172 | 22758.6 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488505_103281 | Not Available | Positive | 3669267 - 3670133 | 30932.4 |
| dinb superfamily protein | SAMN04488505_103282 | Not Available | Positive | 3670225 - 3670710 | 18787.5 |
| endonuclease-8 | SAMN04488505_103283 | Not Available | Negative | 3670712 - 3671443 | 27864.3 |
| uncharacterized conserved protein, duf983 family | SAMN04488505_103284 | Not Available | Negative | 3671504 - 3671935 | 16659.4 |
| transcriptional regulator, arac family | SAMN04488505_103285 | Not Available | Negative | 3671950 - 3672828 | 34274.3 |
| nad(p)h-dependent fmn reductase | SAMN04488505_103286 | Not Available | Negative | 3672910 - 3673467 | 19733.8 |
| hsp20 family protein | SAMN04488505_103287 | Not Available | Negative | 3673554 - 3673952 | 15043.9 |
| capsule assembly protein wzi | SAMN04488505_103288 | Not Available | Positive | 3674225 - 3675679 | 54809.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
