Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yeih | SAMN04488505_103259 | Not Available | Negative | 3646061 - 3646675 | 22402.3 |
| trehalose utilisation | SAMN04488505_103260 | Not Available | Positive | 3646828 - 3647679 | 32844.8 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488505_103261 | Not Available | Positive | 3647683 - 3648735 | 40726.8 |
| hypothetical protein | SAMN04488505_103262 | Not Available | Positive | 3648932 - 3649228 | 11174.5 |
| oxidoreductase molybdopterin binding domain-containing protein | SAMN04488505_103263 | Not Available | Negative | 3649225 - 3649917 | 26414.9 |
| glycogen operon protein | SAMN04488505_103264 | Not Available | Positive | 3650024 - 3652177 | 81496.6 |
| maltooligosyl trehalose synthase | SAMN04488505_103265 | Not Available | Negative | 3652252 - 3654924 | 102339.0 |
| maltooligosyl trehalose hydrolase | SAMN04488505_103266 | Not Available | Negative | 3654931 - 3656766 | 68661.2 |
| 4-alpha-glucanotransferase | SAMN04488505_103267 | Not Available | Negative | 3656763 - 3658241 | 56520.9 |
| hypothetical protein | SAMN04488505_103268 | Not Available | Positive | 3658510 - 3659307 | 29801.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
