Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488505_103239 | Not Available | Negative | 3624224 - 3625426 | 43033.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_103240 | Not Available | Negative | 3625530 - 3626177 | 24862.2 |
| choline dehydrogenase | SAMN04488505_103241 | Not Available | Negative | 3626260 - 3627960 | 64113.5 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04488505_103242 | Not Available | Negative | 3627968 - 3628516 | 20253.5 |
| periplasmic component of the tol biopolymer transport system | SAMN04488505_103243 | Not Available | Negative | 3628539 - 3630050 | 55767.9 |
| hypothetical protein | SAMN04488505_103244 | Not Available | Positive | 3630201 - 3630518 | 11595.9 |
| iron complex outermembrane recepter protein | SAMN04488505_103245 | Not Available | Positive | 3630619 - 3632568 | 73108.8 |
| y_y_y domain-containing protein | SAMN04488505_103246 | Not Available | Positive | 3632708 - 3635593 | 108292.0 |
| sugar phosphate isomerase/epimerase | SAMN04488505_103247 | Not Available | Negative | 3635599 - 3636486 | 33144.7 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488505_103248 | Not Available | Negative | 3636827 - 3637264 | 16842.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
