Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN04488505_103229 | Not Available | Negative | 3605962 - 3607953 | 74329.6 |
| peptidase family s41 | SAMN04488505_103230 | Not Available | Negative | 3608070 - 3609410 | 50532.0 |
| two-component response regulator, sapr family, consists of rec, whth and btad domains | SAMN04488505_103231 | Not Available | Negative | 3609451 - 3611997 | 96017.7 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN04488505_103232 | Not Available | Negative | 3612107 - 3612895 | 28721.1 |
| transcriptional regulator, tetr family | SAMN04488505_103233 | Not Available | Positive | 3613066 - 3613668 | 21915.4 |
| uncharacterized oxidoreductase | SAMN04488505_103234 | Not Available | Positive | 3613730 - 3614476 | 26280.5 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_103235 | Not Available | Negative | 3614526 - 3616415 | 68088.6 |
| protein of unknown function | SAMN04488505_103236 | Not Available | Negative | 3616642 - 3619158 | 94702.3 |
| ragb/susd domain-containing protein | SAMN04488505_103237 | Not Available | Negative | 3619187 - 3620647 | 52961.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_103238 | Not Available | Negative | 3620659 - 3623985 | 122595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
