Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_103219 | Not Available | Negative | 3592829 - 3593218 | 14917.9 |
| pas/pac sensor signal transduction histidine kinase | SAMN04488505_103220 | Not Available | Negative | 3593336 - 3594619 | 48152.8 |
| circadian clock protein kaib | SAMN04488505_103221 | Not Available | Negative | 3594636 - 3594965 | 11821.2 |
| hypothetical protein | SAMN04488505_103222 | Not Available | Negative | 3595273 - 3597003 | 63208.0 |
| hypothetical protein | SAMN04488505_103223 | Not Available | Negative | 3597300 - 3598577 | 48394.0 |
| starch-binding associating with outer membrane | SAMN04488505_103224 | Not Available | Negative | 3598645 - 3600186 | 56117.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_103225 | Not Available | Negative | 3600315 - 3603308 | 109397.0 |
| carbamoyltransferase | SAMN04488505_103226 | Not Available | Negative | 3603488 - 3605398 | 70761.8 |
| hypothetical protein | SAMN04488505_103227 | Not Available | Negative | 3605405 - 3605554 | 5874.78 |
| hypothetical protein | SAMN04488505_103228 | Not Available | Negative | 3605661 - 3605903 | 9429.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
