Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_103209 | Not Available | Negative | 3578533 - 3578931 | 14059.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_103210 | Not Available | Positive | 3579201 - 3581087 | 69000.7 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488505_103211 | Not Available | Negative | 3581262 - 3582671 | 50788.6 |
| glyoxalase-like domain-containing protein | SAMN04488505_103212 | Not Available | Positive | 3583035 - 3583418 | 14191.5 |
| putative abc transport system permease protein | SAMN04488505_103213 | Not Available | Negative | 3583584 - 3585956 | 87432.8 |
| polyhydroxybutyrate depolymerase | SAMN04488505_103214 | Not Available | Positive | 3586191 - 3587114 | 33938.4 |
| purple acid phosphatase, n-terminal domain | SAMN04488505_103215 | Not Available | Negative | 3587154 - 3588731 | 59209.8 |
| cytochrome c peroxidase | SAMN04488505_103216 | Not Available | Negative | 3588756 - 3590597 | 67434.2 |
| ankyrin repeat | SAMN04488505_103217 | Not Available | Positive | 3590746 - 3591870 | 40811.3 |
| glycosyl hydrolases family 43 | SAMN04488505_103218 | Not Available | Negative | 3591879 - 3592787 | 34217.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
