Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN04488505_103199 | Not Available | Positive | 3564907 - 3565872 | 35119.6 |
| predicted alpha-1,6-mannanase, gh76 family | SAMN04488505_103200 | Not Available | Negative | 3565916 - 3567034 | 42235.8 |
| starch-binding associating with outer membrane | SAMN04488505_103201 | Not Available | Negative | 3567230 - 3569026 | 67612.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_103202 | Not Available | Negative | 3569049 - 3572441 | 125359.0 |
| fecr family protein | SAMN04488505_103203 | Not Available | Negative | 3572549 - 3573529 | 36429.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_103204 | Not Available | Negative | 3573681 - 3574271 | 22720.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_103205 | Not Available | Negative | 3574638 - 3575846 | 45453.5 |
| protein of unknown function | SAMN04488505_103206 | Not Available | Positive | 3575931 - 3576653 | 25668.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_103207 | Not Available | Negative | 3576744 - 3577529 | 27836.4 |
| arac-type dna-binding protein | SAMN04488505_103208 | Not Available | Negative | 3577602 - 3578504 | 34209.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
