Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_103189 | Not Available | Negative | 3554897 - 3555826 | 35269.1 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04488505_103190 | Not Available | Negative | 3556044 - 3556793 | 26744.6 |
| hypothetical protein | SAMN04488505_103191 | Not Available | Positive | 3557198 - 3558298 | 40809.2 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04488505_103192 | Not Available | Negative | 3558363 - 3559343 | 36810.5 |
| dihydrofolate reductase | SAMN04488505_103193 | Not Available | Positive | 3559587 - 3560195 | 23267.5 |
| dna-binding transcriptional regulator, merr family | SAMN04488505_103194 | Not Available | Negative | 3560231 - 3561121 | 33925.3 |
| phytoene desaturase | SAMN04488505_103195 | Not Available | Positive | 3561256 - 3562767 | 56944.3 |
| phytoene/squalene synthetase | SAMN04488505_103196 | Not Available | Positive | 3562751 - 3563581 | 31463.2 |
| beta-carotene 3-hydroxylase | SAMN04488505_103197 | Not Available | Positive | 3563592 - 3564062 | 18703.3 |
| lycopene cyclase domain-containing protein | SAMN04488505_103198 | Not Available | Positive | 3564059 - 3564793 | 28382.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
