Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea transport system permease protein | SAMN04488505_103179 | Not Available | Negative | 3543599 - 3544627 | 36928.6 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN04488505_103180 | Not Available | Negative | 3544800 - 3546071 | 46268.5 |
| hypothetical protein | SAMN04488505_103181 | Not Available | Negative | 3546120 - 3547457 | 49345.2 |
| transcriptional regulator, arac family | SAMN04488505_103182 | Not Available | Negative | 3548096 - 3549028 | 35766.8 |
| aldehyde dehydrogenase | SAMN04488505_103183 | Not Available | Positive | 3549199 - 3550725 | 55997.0 |
| hypothetical protein | SAMN04488505_103184 | Not Available | Positive | 3550736 - 3551098 | 13290.0 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04488505_103185 | Not Available | Positive | 3551156 - 3552043 | 31767.0 |
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN04488505_103186 | Not Available | Positive | 3552124 - 3552519 | 14690.5 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488505_103187 | Not Available | Negative | 3552555 - 3553559 | 36848.0 |
| hypothetical protein | SAMN04488505_103188 | Not Available | Positive | 3553703 - 3554794 | 41067.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
