Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate export | SAMN04488505_103169 | Not Available | Positive | 3529707 - 3531062 | 49713.4 |
| mfs transporter, nnp family, nitrate/nitrite transporter | SAMN04488505_103170 | Not Available | Positive | 3531085 - 3532392 | 46786.4 |
| ferredoxin-nitrate reductase | SAMN04488505_103171 | Not Available | Positive | 3532441 - 3535971 | 129760.0 |
| rubredoxin | SAMN04488505_103172 | Not Available | Positive | 3535971 - 3537425 | 55310.6 |
| putative gtp cyclohydrolase 1 type 2, nif3 family | SAMN04488505_103173 | Not Available | Negative | 3537436 - 3538329 | 33090.3 |
| two component transcriptional regulator, luxr family | SAMN04488505_103174 | Not Available | Negative | 3538425 - 3539099 | 25191.5 |
| hypothetical protein | SAMN04488505_103175 | Not Available | Negative | 3539096 - 3540901 | 69334.0 |
| urea abc transporter atp-binding protein | SAMN04488505_103176 | Not Available | Negative | 3540994 - 3541707 | 26163.0 |
| urea abc transporter atp-binding protein | SAMN04488505_103177 | Not Available | Negative | 3541711 - 3542466 | 27719.1 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN04488505_103178 | Not Available | Negative | 3542447 - 3543532 | 39816.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
