Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_103159 | Not Available | Positive | 3520814 - 3521227 | 14281.0 |
| hypothetical protein | SAMN04488505_103160 | Not Available | Positive | 3521286 - 3521438 | 5313.48 |
| hypothetical protein | SAMN04488505_103161 | Not Available | Negative | 3521543 - 3521878 | 13036.8 |
| hypothetical protein | SAMN04488505_103162 | Not Available | Negative | 3521871 - 3523154 | 47252.9 |
| hd domain-containing protein | SAMN04488505_103163 | Not Available | Negative | 3523435 - 3524085 | 23967.5 |
| arac-type dna-binding protein | SAMN04488505_103164 | Not Available | Negative | 3524151 - 3525008 | 32628.4 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN04488505_103165 | Not Available | Negative | 3525030 - 3525728 | 26395.3 |
| uroporphyrinogen-iii c-methyltransferase | SAMN04488505_103166 | Not Available | Negative | 3525703 - 3526503 | 28589.8 |
| assimilatory nitrite reductase (nad(p)h) large subunit precursor | SAMN04488505_103167 | Not Available | Positive | 3526700 - 3529201 | 91051.7 |
| assimilatory nitrite reductase (nad(p)h) small subunit | SAMN04488505_103168 | Not Available | Positive | 3529225 - 3529608 | 14289.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
