Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488505_103139 | Not Available | Negative | 3498738 - 3499637 | 35445.1 |
| n-acetylneuraminate synthase | SAMN04488505_103140 | Not Available | Negative | 3499634 - 3500542 | 34025.7 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN04488505_103141 | Not Available | Negative | 3500572 - 3501069 | 17763.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_103142 | Not Available | Negative | 3501089 - 3501892 | 28354.8 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN04488505_103143 | Not Available | Negative | 3501899 - 3503242 | 49039.9 |
| transketolase | SAMN04488505_103144 | Not Available | Negative | 3503254 - 3504147 | 32657.7 |
| transketolase subunit a | SAMN04488505_103145 | Not Available | Negative | 3504147 - 3505004 | 31431.7 |
| spore coat polysaccharide biosynthesis protein spsf | SAMN04488505_103146 | Not Available | Negative | 3505001 - 3505843 | 32518.8 |
| hypothetical protein | SAMN04488505_103147 | Not Available | Negative | 3505836 - 3506855 | 38172.7 |
| hypothetical protein | SAMN04488505_103148 | Not Available | Negative | 3507171 - 3507512 | 13242.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
