Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_103129 | Not Available | Negative | 3486024 - 3488228 | 81861.1 |
| hypothetical protein | SAMN04488505_103130 | Not Available | Negative | 3488282 - 3488620 | 12422.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_103131 | Not Available | Positive | 3488722 - 3489279 | 21735.5 |
| hypothetical protein | SAMN04488505_103132 | Not Available | Positive | 3489276 - 3489692 | 15419.1 |
| right handed beta helix region | SAMN04488505_103133 | Not Available | Negative | 3489676 - 3491469 | 66174.1 |
| starch-binding associating with outer membrane | SAMN04488505_103134 | Not Available | Negative | 3491560 - 3493044 | 54826.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_103135 | Not Available | Negative | 3493059 - 3496421 | 124384.0 |
| fecr family protein | SAMN04488505_103136 | Not Available | Negative | 3496487 - 3497632 | 41401.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_103137 | Not Available | Positive | 3497791 - 3498384 | 23259.8 |
| quaternary ammonium compound-resistance protein suge | SAMN04488505_103138 | Not Available | Negative | 3498367 - 3498732 | 13645.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
