Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_10389 | Not Available | Negative | 3434673 - 3435740 | 39802.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_10390 | Not Available | Negative | 3435923 - 3437248 | 49230.7 |
| helix-turn-helix domain-containing protein | SAMN04488505_10391 | Not Available | Negative | 3437469 - 3438311 | 32424.2 |
| Trna-leu | Not Available | Not Available | Positive | 3438411 - 3438497 | Not Available |
| hypothetical protein | SAMN04488505_10393 | Not Available | Negative | 3438577 - 3440991 | 90381.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_10394 | Not Available | Positive | 3441274 - 3441876 | 23100.0 |
| fecr family protein | SAMN04488505_10395 | Not Available | Positive | 3442042 - 3443235 | 43669.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10396 | Not Available | Positive | 3443446 - 3446763 | 119955.0 |
| starch-binding associating with outer membrane | SAMN04488505_10397 | Not Available | Positive | 3446778 - 3448244 | 53671.6 |
| fad dependent oxidoreductase | SAMN04488505_10398 | Not Available | Positive | 3448275 - 3449828 | 58132.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
