Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10379 | Not Available | Positive | 3425313 - 3425750 | 15944.6 |
| hypothetical protein | SAMN04488505_10380 | Not Available | Positive | 3425766 - 3426203 | 15518.7 |
| hypothetical protein | SAMN04488505_10381 | Not Available | Positive | 3426200 - 3426871 | 25699.7 |
| aminopeptidase n | SAMN04488505_10382 | Not Available | Positive | 3426878 - 3429304 | 91090.6 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN04488505_10383 | Not Available | Positive | 3429407 - 3430219 | 29455.9 |
| Trna-leu | Not Available | Not Available | Positive | 3430451 - 3430537 | Not Available |
| peptidase family s41 | SAMN04488505_10385 | Not Available | Negative | 3430765 - 3431775 | 37574.5 |
| dihydrofolate reductase | SAMN04488505_10386 | Not Available | Negative | 3431917 - 3432561 | 23736.4 |
| dihydrofolate reductase | SAMN04488505_10387 | Not Available | Negative | 3432821 - 3433327 | 18883.5 |
| hypothetical protein | SAMN04488505_10388 | Not Available | Negative | 3433819 - 3434250 | 16261.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
