Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl-trna synthetase | SAMN04488505_10369 | Not Available | Negative | 3415157 - 3416632 | 55917.6 |
| hypothetical protein | SAMN04488505_10370 | Not Available | Positive | 3416911 - 3417900 | 35335.4 |
| hypothetical protein | SAMN04488505_10371 | Not Available | Positive | 3417996 - 3419546 | 55852.7 |
| hypothetical protein | SAMN04488505_10372 | Not Available | Positive | 3419587 - 3419691 | 3970.71 |
| trna dimethylallyltransferase | SAMN04488505_10373 | Not Available | Negative | 3419688 - 3420584 | 33689.5 |
| pria4b orf-3-like protein | SAMN04488505_10374 | Not Available | Negative | 3420593 - 3421165 | 22034.7 |
| hdig domain-containing protein | SAMN04488505_10375 | Not Available | Negative | 3421279 - 3422715 | 54442.1 |
| l-threonylcarbamoyladenylate synthase | SAMN04488505_10376 | Not Available | Negative | 3422833 - 3423453 | 23148.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_10377 | Not Available | Negative | 3423472 - 3424695 | 46091.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_10378 | Not Available | Positive | 3424879 - 3425316 | 16713.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
