Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04488505_10359 | Not Available | Positive | 3403957 - 3404340 | 13909.7 |
| rhodanese-related sulfurtransferase | SAMN04488505_10360 | Not Available | Negative | 3404582 - 3404890 | 11338.5 |
| pasta domain-containing protein | SAMN04488505_10361 | Not Available | Negative | 3405154 - 3406005 | 31114.0 |
| d-alanine-d-alanine ligase | SAMN04488505_10362 | Not Available | Negative | 3406059 - 3407051 | 36148.3 |
| protein of unknown function | SAMN04488505_10363 | Not Available | Negative | 3407179 - 3407631 | 16284.3 |
| 4fe-4s dicluster domain-containing protein | SAMN04488505_10364 | Not Available | Negative | 3407728 - 3408075 | 12609.8 |
| hypothetical protein | SAMN04488505_10365 | Not Available | Positive | 3408169 - 3409167 | 37451.4 |
| do/deqq family serine protease | SAMN04488505_10366 | Not Available | Positive | 3409567 - 3411111 | 55544.2 |
| two component transcriptional regulator, lyttr family | SAMN04488505_10367 | Not Available | Negative | 3411381 - 3412142 | 28916.3 |
| two component regulator propeller | SAMN04488505_10368 | Not Available | Negative | 3412139 - 3415144 | 114929.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
