Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_02637 | SAMN04488505_10319 | Not Available | Positive | 3336080 - 3337501 | Not Available |
| transcriptional regulator | SAMN04488505_10320 | Not Available | Positive | 3337547 - 3338776 | 46287.4 |
| lipopolysaccharide-assembly | SAMN04488505_10321 | Not Available | Positive | 3338824 - 3339339 | 18924.6 |
| hypothetical protein | SAMN04488505_10322 | Not Available | Positive | 3339378 - 3340688 | 48532.9 |
| protein translocase subunit secg | SAMN04488505_10323 | Not Available | Positive | 3340709 - 3341065 | 12420.4 |
| upf0755 protein | SAMN04488505_10324 | Not Available | Positive | 3341134 - 3342204 | 40605.5 |
| membrane protein | SAMN04488505_10325 | Not Available | Positive | 3342218 - 3343159 | 36175.5 |
| peroxiredoxin | SAMN04488505_10326 | Not Available | Positive | 3343393 - 3343989 | 21735.9 |
| zinc carboxypeptidase | SAMN04488505_10327 | Not Available | Negative | 3344061 - 3346580 | 94572.9 |
| hypothetical protein | SAMN04488505_10328 | Not Available | Negative | 3346625 - 3347167 | 20199.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
