Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN04488505_1039 | Not Available | Negative | 3328522 - 3329196 | 25466.7 |
| phosphoglucomutase | SAMN04488505_10310 | Not Available | Positive | 3329402 - 3331126 | 63502.3 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN04488505_10311 | Not Available | Negative | 3331210 - 3331707 | 18939.5 |
| 4fe-4s dicluster domain-containing protein | SAMN04488505_10312 | Not Available | Positive | 3331949 - 3333265 | 49388.7 |
| four helix bundle protein | SAMN04488505_10313 | Not Available | Positive | 3333328 - 3333696 | 14688.7 |
| cysteine-rich domain-containing protein | SAMN04488505_10314 | Not Available | Positive | 3333771 - 3334553 | 28679.5 |
| hypothetical protein | SAMN04488505_10315 | Not Available | Positive | 3334580 - 3335095 | 19613.6 |
| Trna-gly | Not Available | Not Available | Positive | 3335140 - 3335215 | Not Available |
| hypothetical protein | SAMN04488505_10317 | Not Available | Positive | 3335345 - 3335560 | 7967.75 |
| hypothetical protein | SAMN04488505_10318 | Not Available | Positive | 3335529 - 3335957 | 16230.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
