Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-acetyltransferase | SAMN04488505_1021193 | Not Available | Positive | 3313518 - 3314537 | 37305.6 |
| integrase core domain-containing protein | SAMN04488505_1021194 | Not Available | Negative | 3314693 - 3314930 | 8903.82 |
| hypothetical protein | SAMN04488505_1031 | Not Available | Negative | 3314931 - 3315203 | 10172.1 |
| hypothetical protein | SAMN04488505_1032 | Not Available | Negative | 3315313 - 3315942 | 24312.5 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN04488505_1033 | Not Available | Negative | 3316111 - 3319269 | 116112.0 |
| abc-type transport system, involved in lipoprotein release, permease component | SAMN04488505_1034 | Not Available | Negative | 3319379 - 3321760 | 87840.1 |
| Trna-his | Not Available | Not Available | Positive | 3322062 - 3322138 | Not Available |
| protein of unknown function | SAMN04488505_1036 | Not Available | Positive | 3322293 - 3322880 | 22471.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_1037 | Not Available | Positive | 3323144 - 3325729 | 95260.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_1038 | Not Available | Positive | 3326045 - 3328525 | 92497.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
