Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_1021183 | Not Available | Positive | 3302764 - 3302958 | 7337.81 |
| histidine kinase | SAMN04488505_1021184 | Not Available | Positive | 3303101 - 3304150 | 40287.2 |
| two component transcriptional regulator, lyttr family | SAMN04488505_1021185 | Not Available | Positive | 3304147 - 3304863 | 27577.9 |
| upf0176 protein | SAMN04488505_1021186 | Not Available | Negative | 3305004 - 3306047 | 39841.4 |
| hypothetical protein | SAMN04488505_1021187 | Not Available | Negative | 3306418 - 3306693 | 10504.2 |
| carboxypepd_reg-like domain-containing protein | SAMN04488505_1021188 | Not Available | Negative | 3307139 - 3309658 | 96411.0 |
| hypothetical protein | SAMN04488505_1021189 | Not Available | Negative | 3309678 - 3310046 | 13182.9 |
| hypothetical protein | SAMN04488505_1021190 | Not Available | Negative | 3310827 - 3311420 | 22256.7 |
| o-succinylhomoserine sulfhydrylase | SAMN04488505_1021191 | Not Available | Negative | 3311484 - 3312674 | 43922.8 |
| putative redox protein | SAMN04488505_1021192 | Not Available | Negative | 3312769 - 3313191 | 15684.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
