Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_1021173 | Not Available | Negative | 3285369 - 3285872 | 19608.2 |
| translation initiation factor if-3 | SAMN04488505_1021174 | Not Available | Negative | 3286159 - 3286842 | 26251.6 |
| threonyl-trna synthetase | SAMN04488505_1021175 | Not Available | Negative | 3286969 - 3288909 | 73311.0 |
| tonb-dependent receptor plug domain | SAMN04488505_1021176 | Not Available | Negative | 3289192 - 3291582 | 90721.3 |
| atp-binding cassette, subfamily f, member 3 | SAMN04488505_1021177 | Not Available | Positive | 3292099 - 3294081 | 75094.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488505_1021178 | Not Available | Positive | 3294398 - 3295084 | 25957.5 |
| signal transduction histidine kinase | SAMN04488505_1021179 | Not Available | Positive | 3295197 - 3296561 | 51869.7 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN04488505_1021180 | Not Available | Positive | 3296912 - 3298183 | 47969.9 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04488505_1021181 | Not Available | Positive | 3298325 - 3299413 | 40517.6 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488505_1021182 | Not Available | Positive | 3299510 - 3302608 | 114193.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
