Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-3-phosphoglycerate dehydrogenase | SAMN04488505_1021163 | Not Available | Negative | 3275911 - 3277146 | 44532.9 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_1021164 | Not Available | Positive | 3277399 - 3278601 | 45731.6 |
| cation diffusion facilitator family transporter | SAMN04488505_1021165 | Not Available | Negative | 3278616 - 3279593 | 36811.2 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN04488505_1021166 | Not Available | Positive | 3279802 - 3280722 | 32651.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_1021167 | Not Available | Negative | 3280832 - 3281422 | 21049.3 |
| hypothetical protein | SAMN04488505_1021168 | Not Available | Positive | 3281521 - 3282033 | 19418.8 |
| sphingolipid delta-4 desaturase | SAMN04488505_1021169 | Not Available | Negative | 3282043 - 3283062 | 39725.2 |
| hypothetical protein | SAMN04488505_1021170 | Not Available | Negative | 3283213 - 3283803 | 22675.0 |
| hypothetical protein | SAMN04488505_1021171 | Not Available | Negative | 3283838 - 3284467 | 23587.0 |
| hypothetical protein | SAMN04488505_1021172 | Not Available | Negative | 3284492 - 3284926 | 16711.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
