Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_1021143 | Not Available | Positive | 3244285 - 3245028 | 26247.6 |
| doxx-like family protein | SAMN04488505_1021144 | Not Available | Positive | 3245039 - 3245431 | 14064.4 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04488505_1021145 | Not Available | Negative | 3245535 - 3245972 | 16293.7 |
| eama-like transporter family protein | SAMN04488505_1021146 | Not Available | Negative | 3246059 - 3246886 | 29543.4 |
| fmn-dependent nadh-azoreductase | SAMN04488505_1021147 | Not Available | Negative | 3246888 - 3247526 | 24085.2 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN04488505_1021148 | Not Available | Positive | 3247604 - 3249067 | 54736.5 |
| Trna-arg | Not Available | Not Available | Positive | 3249470 - 3249543 | Not Available |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN04488505_1021150 | Not Available | Positive | 3249695 - 3250204 | 19519.0 |
| membrane associated serine protease, rhomboid family | SAMN04488505_1021151 | Not Available | Positive | 3250240 - 3250851 | 23352.1 |
| trna(ile)-lysidine synthase | SAMN04488505_1021152 | Not Available | Negative | 3250855 - 3252204 | 51376.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
