Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duplicated orphan permease | SAMN04488505_1021133 | Not Available | Positive | 3231604 - 3233958 | 86598.0 |
| hypothetical protein | SAMN04488505_1021134 | Not Available | Negative | 3234084 - 3234635 | 21121.9 |
| predicted arabinose efflux permease, mfs family | SAMN04488505_1021135 | Not Available | Negative | 3234743 - 3235882 | 40783.2 |
| phosphoglycolate phosphatase, had superfamily | SAMN04488505_1021136 | Not Available | Negative | 3235895 - 3236578 | 26043.7 |
| threonine dehydrogenase | SAMN04488505_1021137 | Not Available | Negative | 3236589 - 3237614 | 37630.3 |
| 4-aminobutyrate aminotransferase | SAMN04488505_1021138 | Not Available | Negative | 3237626 - 3238861 | 44975.7 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_1021139 | Not Available | Negative | 3239305 - 3242196 | 98134.3 |
| hypothetical protein | SAMN04488505_1021140 | Not Available | Positive | 3242882 - 3243376 | 19432.3 |
| ribonuclease hi | SAMN04488505_1021141 | Not Available | Negative | 3243377 - 3243826 | 16682.1 |
| transcriptional regulator, hxlr family | SAMN04488505_1021142 | Not Available | Negative | 3243845 - 3244189 | 13203.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
