Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_1021113 | Not Available | Negative | 3210687 - 3211574 | 33223.0 |
| hypothetical protein | SAMN04488505_1021114 | Not Available | Positive | 3211735 - 3212190 | 17419.0 |
| hypothetical protein | SAMN04488505_1021115 | Not Available | Negative | 3212197 - 3213429 | 45864.2 |
| hypothetical protein | SAMN04488505_1021116 | Not Available | Negative | 3213595 - 3214332 | 28063.4 |
| hypothetical protein | SAMN04488505_1021117 | Not Available | Positive | 3214368 - 3214820 | 16778.6 |
| arac-type dna-binding protein | SAMN04488505_1021118 | Not Available | Negative | 3214861 - 3215709 | 32387.9 |
| nadph:quinone reductase | SAMN04488505_1021119 | Not Available | Positive | 3215796 - 3216800 | 35213.5 |
| alpha-l-rhamnosidase | SAMN04488505_1021120 | Not Available | Negative | 3216819 - 3219473 | 98808.6 |
| protein of unknown function | SAMN04488505_1021121 | Not Available | Negative | 3219603 - 3220064 | 17149.8 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN04488505_1021122 | Not Available | Positive | 3220117 - 3221448 | 49248.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
