Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx-like family protein | SAMN04488505_1021103 | Not Available | Negative | 3203162 - 3203548 | 13776.6 |
| hypothetical protein | SAMN04488505_1021104 | Not Available | Negative | 3203767 - 3205071 | 45705.4 |
| peroxiredoxin | SAMN04488505_1021105 | Not Available | Negative | 3205189 - 3205755 | 21178.3 |
| hypothetical protein | SAMN04488505_1021106 | Not Available | Negative | 3205796 - 3206071 | 10046.7 |
| thiosulfate reductase cytochrome b subunit | SAMN04488505_1021107 | Not Available | Positive | 3206371 - 3207036 | 26053.2 |
| oxidoreductase molybdopterin binding domain-containing protein | SAMN04488505_1021108 | Not Available | Positive | 3207017 - 3207805 | 30113.1 |
| peptide-methionine (r)-s-oxide reductase | SAMN04488505_1021109 | Not Available | Positive | 3207840 - 3208328 | 18378.1 |
| peptide-methionine (s)-s-oxide reductase | SAMN04488505_1021110 | Not Available | Positive | 3208335 - 3208997 | 24524.1 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04488505_1021111 | Not Available | Positive | 3209114 - 3209980 | 30866.9 |
| hd domain-containing protein | SAMN04488505_1021112 | Not Available | Positive | 3210148 - 3210579 | 16316.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
