Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_1021093 | Not Available | Positive | 3197113 - 3197808 | 26171.4 |
| hypothetical protein | SAMN04488505_1021094 | Not Available | Negative | 3197829 - 3198083 | 9642.71 |
| hypothetical protein | SAMN04488505_1021095 | Not Available | Negative | 3198175 - 3198501 | 12435.2 |
| hypothetical protein | SAMN04488505_1021096 | Not Available | Negative | 3198641 - 3199066 | 16082.5 |
| alpha-l-fucosidase | SAMN04488505_1021097 | Not Available | Positive | 3199141 - 3200535 | 53045.1 |
| iron(iii) transport system atp-binding protein | SAMN04488505_1021098 | Not Available | Positive | 3200538 - 3201518 | 36238.2 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN04488505_1021099 | Not Available | Positive | 3201649 - 3201885 | 8572.44 |
| hypothetical protein | SAMN04488505_1021100 | Not Available | Positive | 3201951 - 3202664 | 27328.9 |
| metal binding domain of ada | SAMN04488505_1021101 | Not Available | Positive | 3202671 - 3202931 | 9465.72 |
| hypothetical protein | SAMN04488505_1021102 | Not Available | Negative | 3202909 - 3203139 | 8655.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
