Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannan endo-1,4-beta-mannosidase | SAMN04488505_1021073 | Not Available | Negative | 3172701 - 3173825 | 42444.1 |
| starch-binding associating with outer membrane | SAMN04488505_1021074 | Not Available | Negative | 3174242 - 3175825 | 58578.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_1021075 | Not Available | Negative | 3175854 - 3179006 | 114922.0 |
| arac-type dna-binding protein | SAMN04488505_1021076 | Not Available | Positive | 3179220 - 3180110 | 34223.4 |
| hypothetical protein | SAMN04488505_1021077 | Not Available | Positive | 3180309 - 3181031 | 26476.1 |
| response regulator receiver domain-containing protein | SAMN04488505_1021078 | Not Available | Positive | 3181036 - 3181338 | 10567.9 |
| glyoxalase family protein | SAMN04488505_1021079 | Not Available | Positive | 3181374 - 3182330 | 35532.2 |
| phospholipase/carboxylesterase | SAMN04488505_1021080 | Not Available | Positive | 3182332 - 3182958 | 22603.9 |
| hypothetical protein | SAMN04488505_1021081 | Not Available | Positive | 3183013 - 3183564 | 21449.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_1021082 | Not Available | Negative | 3183624 - 3185426 | 65830.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
