Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_1021063 | Not Available | Positive | 3162112 - 3163320 | 44564.7 |
| hypothetical protein | SAMN04488505_1021064 | Not Available | Positive | 3163580 - 3164041 | 16358.8 |
| endonuclease v | SAMN04488505_1021065 | Not Available | Positive | 3164051 - 3164746 | 25415.9 |
| hypothetical protein | SAMN04488505_1021066 | Not Available | Positive | 3165121 - 3166194 | 39921.7 |
| protein ccma, bactofilin family | SAMN04488505_1021067 | Not Available | Positive | 3166194 - 3166655 | 16613.8 |
| uncharacterized conserved protein ydhg, yjbr/cyay-like superfamily, duf1801 family | SAMN04488505_1021068 | Not Available | Positive | 3166887 - 3167279 | 14471.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_1021069 | Not Available | Negative | 3167458 - 3168342 | 33179.2 |
| mannobiose 2-epimerase | SAMN04488505_1021070 | Not Available | Negative | 3168384 - 3169586 | 46675.5 |
| 4-o-beta-d-mannosyl-d-glucose phosphorylase | SAMN04488505_1021071 | Not Available | Negative | 3169558 - 3170760 | 44913.1 |
| na+/proline symporter | SAMN04488505_1021072 | Not Available | Negative | 3170795 - 3172627 | 67969.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
