Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fdhd protein | SAMN04488505_1021053 | Not Available | Positive | 3149221 - 3150042 | 29920.2 |
| oxidoreductase alpha (molybdopterin) subunit | SAMN04488505_1021054 | Not Available | Positive | 3150336 - 3152636 | 83970.1 |
| hypothetical protein | SAMN04488505_1021055 | Not Available | Negative | 3152762 - 3154633 | 72008.2 |
| protein of unknown function | SAMN04488505_1021056 | Not Available | Negative | 3154832 - 3154993 | 5729.53 |
| tigr01619 family protein | SAMN04488505_1021057 | Not Available | Negative | 3155086 - 3155844 | 30330.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_1021058 | Not Available | Positive | 3156026 - 3158506 | 91947.9 |
| acyl-coa hydrolase | SAMN04488505_1021059 | Not Available | Positive | 3158821 - 3159300 | 17829.3 |
| abc-type multidrug transport system, atpase and permease component | SAMN04488505_1021060 | Not Available | Negative | 3159304 - 3161094 | 65849.6 |
| hypothetical protein | SAMN04488505_1021061 | Not Available | Negative | 3161254 - 3161526 | 9393.9 |
| hypothetical protein | SAMN04488505_1021062 | Not Available | Negative | 3161588 - 3161818 | 8257.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
