Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04488505_1021003 | Not Available | Negative | 3094816 - 3095619 | 30954.6 |
| predicted oxidoreductase | SAMN04488505_1021004 | Not Available | Negative | 3095641 - 3096726 | 38835.7 |
| dihydroflavonol-4-reductase | SAMN04488505_1021005 | Not Available | Negative | 3096788 - 3097801 | 36672.4 |
| hypothetical protein | SAMN04488505_1021006 | Not Available | Positive | 3098069 - 3099724 | 63646.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_1021007 | Not Available | Positive | 3100025 - 3100531 | 19234.3 |
| hypothetical protein | SAMN04488505_1021008 | Not Available | Positive | 3100524 - 3102968 | 83790.9 |
| hypothetical protein | SAMN04488505_1021009 | Not Available | Positive | 3103047 - 3103382 | 12780.8 |
| methyltransferase domain-containing protein | SAMN04488505_1021010 | Not Available | Positive | 3103461 - 3104360 | 33770.0 |
| methyltransferase domain-containing protein | SAMN04488505_1021011 | Not Available | Positive | 3104537 - 3105220 | 26029.0 |
| dna-binding transcriptional regulator, marr family | SAMN04488505_1021012 | Not Available | Negative | 3105302 - 3105943 | 24686.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
