Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102993 | Not Available | Positive | 3083739 - 3084401 | 23748.8 |
| peptidase family m1 | SAMN04488505_102994 | Not Available | Negative | 3084493 - 3086214 | 66308.9 |
| peptide/nickel transport system substrate-binding protein | SAMN04488505_102995 | Not Available | Positive | 3086283 - 3087935 | 62881.5 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN04488505_102996 | Not Available | Positive | 3088108 - 3088875 | 30289.4 |
| uncharacterized membrane protein | SAMN04488505_102997 | Not Available | Negative | 3089007 - 3090194 | 44523.2 |
| hypothetical protein | SAMN04488505_102998 | Not Available | Positive | 3090391 - 3090729 | 12951.1 |
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN04488505_102999 | Not Available | Negative | 3090719 - 3091315 | 22248.3 |
| short-chain dehydrogenase | SAMN04488505_1021000 | Not Available | Negative | 3091409 - 3092137 | 26737.4 |
| fad/fmn-containing dehydrogenase | SAMN04488505_1021001 | Not Available | Negative | 3092313 - 3093707 | 52427.1 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN04488505_1021002 | Not Available | Negative | 3093707 - 3094594 | 33349.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
