Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa-binding protein | SAMN04488505_102983 | Not Available | Negative | 3073717 - 3073974 | 9456.21 |
| gtp-binding protein lepa | SAMN04488505_102984 | Not Available | Positive | 3074122 - 3075912 | 67121.6 |
| mj0570-related uncharacterized domain-containing protein | SAMN04488505_102985 | Not Available | Positive | 3076048 - 3076689 | 23950.9 |
| protein of unknown function | SAMN04488505_102986 | Not Available | Positive | 3076658 - 3077041 | 15240.4 |
| hypothetical protein | SAMN04488505_102987 | Not Available | Negative | 3077252 - 3077839 | 21516.0 |
| mannose-6-phosphate isomerase, type 1 | SAMN04488505_102988 | Not Available | Negative | 3077892 - 3079106 | 44615.5 |
| putative endonuclease | SAMN04488505_102989 | Not Available | Positive | 3079165 - 3079521 | 13671.4 |
| protein of unknown function | SAMN04488505_102990 | Not Available | Positive | 3079591 - 3080745 | 42584.5 |
| adenylosuccinate lyase | SAMN04488505_102991 | Not Available | Negative | 3081131 - 3082471 | 51129.1 |
| chorismate dehydratase | SAMN04488505_102992 | Not Available | Positive | 3082513 - 3083250 | 27787.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
