Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylhistidine n-methyltransferase | SAMN04488505_102973 | Not Available | Negative | 3064126 - 3065118 | 37545.2 |
| ergothioneine biosynthesis protein egtb | SAMN04488505_102974 | Not Available | Negative | 3065142 - 3066293 | 44803.7 |
| osmoprotectant transport system permease protein | SAMN04488505_102975 | Not Available | Negative | 3066355 - 3067932 | 57312.5 |
| osmoprotectant transport system atp-binding protein | SAMN04488505_102976 | Not Available | Negative | 3067907 - 3068890 | 36299.7 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) component | SAMN04488505_102977 | Not Available | Negative | 3069037 - 3070419 | 49926.5 |
| hypothetical protein | SAMN04488505_102978 | Not Available | Positive | 3070589 - 3070990 | 14481.1 |
| vit family protein | SAMN04488505_102979 | Not Available | Negative | 3070962 - 3071603 | 24280.8 |
| hypothetical protein | SAMN04488505_102980 | Not Available | Negative | 3071619 - 3071819 | 7543.12 |
| ornithine--oxo-acid transaminase | SAMN04488505_102981 | Not Available | Negative | 3071949 - 3073181 | 44788.3 |
| hypothetical protein | SAMN04488505_102982 | Not Available | Negative | 3073329 - 3073661 | 12251.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
