Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail collar domain | SAMN04488505_102963 | Not Available | Negative | 3052776 - 3053198 | 15382.3 |
| hypothetical protein | SAMN04488505_102964 | Not Available | Negative | 3053298 - 3053915 | 21949.9 |
| hypothetical protein | SAMN04488505_102965 | Not Available | Positive | 3054161 - 3054625 | 16973.9 |
| signal transduction histidine kinase | SAMN04488505_102966 | Not Available | Positive | 3054829 - 3056454 | 62261.7 |
| two component transcriptional regulator, lyttr family | SAMN04488505_102967 | Not Available | Positive | 3056458 - 3057213 | 28731.0 |
| asma family protein | SAMN04488505_102968 | Not Available | Positive | 3057310 - 3059751 | 91518.0 |
| hypothetical protein | SAMN04488505_102969 | Not Available | Positive | 3059835 - 3060251 | 16013.1 |
| hypothetical protein | SAMN04488505_102970 | Not Available | Negative | 3060802 - 3061047 | 9352.46 |
| dipeptidyl-peptidase-4 | SAMN04488505_102971 | Not Available | Positive | 3061297 - 3063483 | 82339.3 |
| dinb superfamily protein | SAMN04488505_102972 | Not Available | Positive | 3063643 - 3064122 | 18309.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
