Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted amidohydrolase | SAMN04488505_102953 | Not Available | Negative | 3041079 - 3042020 | 34852.1 |
| transcriptional regulator, arac family | SAMN04488505_102954 | Not Available | Negative | 3042084 - 3042884 | 29983.5 |
| nadph:quinone reductase | SAMN04488505_102955 | Not Available | Positive | 3042929 - 3043879 | 32975.9 |
| hypothetical protein | SAMN04488505_102956 | Not Available | Negative | 3043772 - 3044029 | 9450.59 |
| hypothetical protein | SAMN04488505_102957 | Not Available | Negative | 3044074 - 3044622 | 21055.8 |
| predicted oxidoreductase | SAMN04488505_102958 | Not Available | Negative | 3044912 - 3045862 | 34765.2 |
| trehalose 6-phosphate synthase /trehalose 6-phosphatase | SAMN04488505_102959 | Not Available | Positive | 3046287 - 3048458 | 83849.6 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN04488505_102960 | Not Available | Negative | 3048600 - 3050381 | 68746.9 |
| glucokinase | SAMN04488505_102961 | Not Available | Positive | 3050741 - 3051805 | 39052.1 |
| hypothetical protein | SAMN04488505_102962 | Not Available | Negative | 3051820 - 3052515 | 25488.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
