Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease subunit gamma | SAMN04488505_102942 | Not Available | Positive | 3033120 - 3033422 | 11138.6 |
| urease subunit beta | SAMN04488505_102943 | Not Available | Positive | 3033459 - 3033833 | 13854.8 |
| urease subunit alpha | SAMN04488505_102944 | Not Available | Positive | 3033830 - 3035551 | 61729.1 |
| urease accessory protein | SAMN04488505_102945 | Not Available | Positive | 3035573 - 3036100 | 19869.4 |
| urease accessory protein | SAMN04488505_102946 | Not Available | Positive | 3036238 - 3036918 | 25542.9 |
| urease accessory protein | SAMN04488505_102947 | Not Available | Positive | 3036923 - 3037558 | 22982.9 |
| urease accessory protein | SAMN04488505_102948 | Not Available | Positive | 3037555 - 3038358 | 30266.7 |
| cytochrome c biogenesis protein transmembrane region | SAMN04488505_102949 | Not Available | Positive | 3038365 - 3039069 | 26025.4 |
| h+/cl-antiporter clca | SAMN04488505_102951 | Not Available | Positive | 3039368 - 3040669 | 46926.3 |
| protein of unknown function | SAMN04488505_102952 | Not Available | Positive | 3040676 - 3041077 | 14955.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
