Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102932 | Not Available | Positive | 3020308 - 3020505 | 7259.5 |
| outer membrane protein tolc | SAMN04488505_102933 | Not Available | Positive | 3021215 - 3022618 | 51373.6 |
| multidrug efflux pump subunit acrb | SAMN04488505_102934 | Not Available | Positive | 3022623 - 3025805 | 115821.0 |
| rnd family efflux transporter, mfp subunit | SAMN04488505_102935 | Not Available | Positive | 3025820 - 3026902 | 39490.4 |
| hypothetical protein | SAMN04488505_102936 | Not Available | Positive | 3027118 - 3028695 | 56246.6 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN04488505_102937 | Not Available | Negative | 3028820 - 3029764 | 35153.0 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04488505_102938 | Not Available | Negative | 3029877 - 3031067 | 43644.6 |
| arac-type dna-binding protein | SAMN04488505_102939 | Not Available | Negative | 3031148 - 3032029 | 33724.6 |
| pap2 superfamily protein | SAMN04488505_102940 | Not Available | Negative | 3032073 - 3032885 | 29766.7 |
| hypothetical protein | SAMN04488505_102941 | Not Available | Negative | 3032882 - 3033025 | 5713.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
