Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102922 | Not Available | Negative | 3008243 - 3008443 | 6851.61 |
| two component transcriptional regulator, lyttr family | SAMN04488505_102923 | Not Available | Negative | 3008571 - 3009266 | 26249.1 |
| hypothetical protein | SAMN04488505_102924 | Not Available | Negative | 3009412 - 3010020 | 21459.3 |
| protein of unknown function | SAMN04488505_102925 | Not Available | Negative | 3010072 - 3011388 | 48733.0 |
| substrate import-associated zinc metallohydrolase lipoprotein | SAMN04488505_102926 | Not Available | Negative | 3011396 - 3012325 | 34754.7 |
| starch-binding associating with outer membrane | SAMN04488505_102927 | Not Available | Negative | 3012329 - 3013780 | 54760.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102928 | Not Available | Negative | 3013780 - 3017169 | 126247.0 |
| hypothetical protein | SAMN04488505_102929 | Not Available | Positive | 3017579 - 3019186 | 59979.3 |
| hypothetical protein | SAMN04488505_102930 | Not Available | Negative | 3019183 - 3019440 | 9889.2 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN04488505_102931 | Not Available | Positive | 3019579 - 3020262 | 24531.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
