Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN04488505_102912 | Not Available | Positive | 2993148 - 2994791 | 60001.5 |
| pap2 superfamily protein | SAMN04488505_102913 | Not Available | Negative | 2994730 - 2995605 | 32517.1 |
| nad-dependent deacetylase | SAMN04488505_102914 | Not Available | Positive | 2995725 - 2996414 | 25551.8 |
| hypothetical protein | SAMN04488505_102915 | Not Available | Negative | 2996443 - 2998371 | 70720.8 |
| saccharopine dehydrogenase nadp binding domain-containing protein | SAMN04488505_102916 | Not Available | Negative | 2998489 - 2999814 | 50258.2 |
| dna gyrase subunit a | SAMN04488505_102917 | Not Available | Positive | 3000423 - 3002999 | 96651.0 |
| hypothetical protein | SAMN04488505_102918 | Not Available | Positive | 3003177 - 3004442 | 47125.8 |
| lysozyme | SAMN04488505_102919 | Not Available | Negative | 3004509 - 3005180 | 25405.7 |
| hypothetical protein | SAMN04488505_102920 | Not Available | Negative | 3005364 - 3005543 | 6372.86 |
| signal transduction histidine kinase | SAMN04488505_102921 | Not Available | Negative | 3005873 - 3008074 | 82445.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
