Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_102882 | Not Available | Negative | 2956305 - 2956478 | 6492.98 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488505_102883 | Not Available | Negative | 2956572 - 2956997 | 16163.2 |
| predicted arabinose efflux permease, mfs family | SAMN04488505_102884 | Not Available | Negative | 2957021 - 2958205 | 41651.6 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04488505_102885 | Not Available | Positive | 2958335 - 2959324 | 37120.4 |
| putative abc transport system permease protein | SAMN04488505_102886 | Not Available | Positive | 2959495 - 2961858 | 87820.3 |
| hypothetical protein | SAMN04488505_102887 | Not Available | Negative | 2961866 - 2962222 | 13029.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_102888 | Not Available | Negative | 2962281 - 2962871 | 23027.4 |
| tetratricopeptide repeat-containing protein | SAMN04488505_102889 | Not Available | Positive | 2962885 - 2964537 | 64066.3 |
| 2-methylisocitrate lyase, pep mutase family | SAMN04488505_102890 | Not Available | Negative | 2964586 - 2965338 | 27570.2 |
| tonb-dependent receptor | SAMN04488505_102891 | Not Available | Positive | 2965680 - 2968433 | 103527.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
