Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted membrane protein | SAMN04488505_102872 | Not Available | Positive | 2950943 - 2951932 | 37226.6 |
| hypothetical protein | SAMN04488505_102873 | Not Available | Positive | 2951919 - 2953082 | 43337.7 |
| hypothetical protein | SAMN04488505_102874 | Not Available | Positive | 2953181 - 2953735 | 20938.9 |
| predicted o-methyltransferase yrrm | SAMN04488505_102875 | Not Available | Positive | 2953772 - 2954350 | 21404.4 |
| transcriptional regulator, hxlr family | SAMN04488505_102876 | Not Available | Negative | 2954386 - 2954766 | 14451.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_102877 | Not Available | Positive | 2954891 - 2955685 | 28253.0 |
| Trna-pseudo | Not Available | Not Available | Positive | 2955913 - 2956001 | Not Available |
| Trna-pseudo | Not Available | Not Available | Positive | 2956004 - 2956093 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2956096 - 2956171 | Not Available |
| Trna-pseudo | Not Available | Not Available | Positive | 2956179 - 2956266 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
