Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488505_102852 | Not Available | Negative | 2920923 - 2922371 | 53114.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102853 | Not Available | Negative | 2922400 - 2925672 | 118006.0 |
| fecr family protein | SAMN04488505_102854 | Not Available | Negative | 2925953 - 2927179 | 43978.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_102855 | Not Available | Negative | 2927315 - 2927908 | 22921.1 |
| protein of unknown function | SAMN04488505_102856 | Not Available | Positive | 2928050 - 2928397 | 12639.2 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN04488505_102857 | Not Available | Positive | 2928676 - 2930181 | 57391.4 |
| conserved hypothetical protein | SAMN04488505_102858 | Not Available | Positive | 2930226 - 2930663 | 16149.2 |
| hypothetical protein | SAMN04488505_102859 | Not Available | Negative | 2930677 - 2930901 | 8524.14 |
| protein of unknown function | SAMN04488505_102860 | Not Available | Negative | 2930928 - 2931488 | 21870.9 |
| arac-type dna-binding protein | SAMN04488505_102861 | Not Available | Positive | 2931836 - 2932375 | 20686.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
