Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sprb repeat-containing protein | SAMN04488505_102842 | Not Available | Positive | 2901286 - 2906946 | 197554.0 |
| alpha-l-arabinofuranosidase | SAMN04488505_102843 | Not Available | Positive | 2907099 - 2909066 | 72234.1 |
| hypothetical protein | SAMN04488505_102844 | Not Available | Positive | 2909167 - 2909421 | 9612.26 |
| tpr repeat | SAMN04488505_102845 | Not Available | Positive | 2909872 - 2912010 | 81375.1 |
| hypothetical protein | SAMN04488505_102846 | Not Available | Negative | 2912000 - 2912131 | 5186.33 |
| terpene synthase family, metal binding domain | SAMN04488505_102847 | Not Available | Positive | 2912459 - 2913436 | 38105.9 |
| signal transduction histidine kinase | SAMN04488505_102848 | Not Available | Negative | 2913421 - 2915169 | 65084.5 |
| signal transduction histidine kinase | SAMN04488505_102849 | Not Available | Negative | 2915327 - 2917054 | 64353.5 |
| hypothetical protein | SAMN04488505_102850 | Not Available | Negative | 2917172 - 2917318 | 5645.13 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_102851 | Not Available | Negative | 2917358 - 2920798 | 123972.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
