Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-d-arabinonate dehydratase | SAMN04488505_102832 | Not Available | Positive | 2878691 - 2879542 | 31758.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_102833 | Not Available | Positive | 2879862 - 2882252 | 89296.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102834 | Not Available | Positive | 2882659 - 2885748 | 112796.0 |
| starch-binding associating with outer membrane | SAMN04488505_102835 | Not Available | Positive | 2885755 - 2887236 | 55510.7 |
| hypothetical protein | SAMN04488505_102836 | Not Available | Positive | 2887490 - 2889211 | 63694.6 |
| fibronectin type iii domain-containing protein | SAMN04488505_102837 | Not Available | Positive | 2889230 - 2891467 | 82370.1 |
| endou nuclease | SAMN04488505_102838 | Not Available | Positive | 2891464 - 2894199 | 101183.0 |
| hypothetical protein | SAMN04488505_102839 | Not Available | Positive | 2894214 - 2894636 | 16479.3 |
| hypothetical protein | SAMN04488505_102840 | Not Available | Positive | 2894666 - 2899141 | 161985.0 |
| fibronectin type 3 domain-containing protein | SAMN04488505_102841 | Not Available | Positive | 2899141 - 2901258 | 79061.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
