Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | SAMN04488505_102822 | Not Available | Negative | 2870929 - 2872269 | 49377.7 |
| hypothetical protein | SAMN04488505_102823 | Not Available | Positive | 2872593 - 2873108 | 17905.1 |
| hypothetical protein | SAMN04488505_102824 | Not Available | Positive | 2873266 - 2873724 | 17355.8 |
| hypothetical protein | SAMN04488505_102825 | Not Available | Positive | 2873734 - 2873898 | 5940.18 |
| ahpc/tsa family protein | SAMN04488505_102826 | Not Available | Negative | 2873910 - 2874512 | 21695.2 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488505_102827 | Not Available | Negative | 2874520 - 2874981 | 17787.6 |
| hypothetical protein | SAMN04488505_102828 | Not Available | Positive | 2875129 - 2875380 | 9949.7 |
| plasmid stabilization system protein pare | SAMN04488505_102829 | Not Available | Positive | 2875371 - 2875682 | 12231.0 |
| arac-type dna-binding protein | SAMN04488505_102830 | Not Available | Negative | 2875666 - 2876553 | 33547.5 |
| hypothetical protein | SAMN04488505_102831 | Not Available | Positive | 2877250 - 2878503 | 45750.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
