Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 2,3-dioxygenase | SAMN04488505_102812 | Not Available | Negative | 2857586 - 2857972 | 13815.4 |
| transcriptional regulator, tetr family | SAMN04488505_102813 | Not Available | Negative | 2858162 - 2858749 | 22874.8 |
| beta-glucosidase | SAMN04488505_102814 | Not Available | Positive | 2858915 - 2861065 | 78611.9 |
| hypothetical protein | SAMN04488505_102815 | Not Available | Positive | 2861236 - 2861622 | 14227.9 |
| membrane protein | SAMN04488505_102816 | Not Available | Positive | 2861673 - 2862674 | 37594.5 |
| n-acetylated-alpha-linked acidic dipeptidase | SAMN04488505_102817 | Not Available | Positive | 2862781 - 2864997 | 80059.8 |
| arginase | SAMN04488505_102818 | Not Available | Positive | 2865005 - 2865904 | 32831.5 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_102819 | Not Available | Positive | 2865981 - 2867099 | 41202.7 |
| putative abc transport system permease protein | SAMN04488505_102820 | Not Available | Negative | 2867111 - 2868337 | 43765.5 |
| putative abc transport system atp-binding protein | SAMN04488505_102821 | Not Available | Negative | 2868506 - 2869249 | 27319.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
